PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0569s0012.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 203aa    MW: 23378.7 Da    PI: 9.0311
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0569s0012.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.83.5e-121231961998
                          -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                   B3  19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                           k+ +++h + ++e+ ++tlede+g++   k+  + ++    l++GW+ F  +++L +gD +vF+l++ ++f  +v ++r
  Kalax.0569s0012.1.p 123 VKPMVQSHAHMPKEDEMITLEDEDGNESPSKYLADITR----LSGGWRCFTLDHELVDGDALVFQLIRPTKF--KVYIIR 196
                          5777888866677888****************666666....*************************97777..888877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.75E-17115198IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.9E-13117198IPR015300DNA-binding pseudobarrel domain
CDDcd100175.32E-17120196No hitNo description
SMARTSM010193.8E-11122198IPR003340B3 DNA binding domain
PfamPF023626.1E-10124196IPR003340B3 DNA binding domain
PROSITE profilePS508639.093140198IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MVVSATSNYE ELRRQRLEEK KKRMEEVNLL NLSKSLSAAT PKSSPAKHRK PKSARKEVNL  60
SAVRRFRRMA GKSRPDYKEG MRLMLSREDL LNHVYASHES RMSAVERAEQ LESELGSEYP  120
CFVKPMVQSH AHMPKEDEMI TLEDEDGNES PSKYLADITR LSGGWRCFTL DHELVDGDAL  180
VFQLIRPTKF KVYIIRVNEH EN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007042396.15e-75AP2/B3-like transcriptional factor family protein, putative
RefseqXP_010647760.14e-75PREDICTED: B3 domain-containing protein At3g19184 isoform X1
SwissprotQ1G3M36e-56Y3918_ARATH; B3 domain-containing protein At3g19184
TrEMBLF6HQC16e-77F6HQC1_VITVI; Putative uncharacterized protein
STRINGVIT_03s0063g00620.t012e-76(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.19e-48B3 family protein